创建时间
2026/06/16 16:00:59
更新时间
2026/06/16 16:01:01
完成时间
2026/06/16 16:01:01
运行类型
结构化编译
请求内容
Structured payload
Workflow IR 已保存
{
"workflow": {
"inputs": {
"raw_r1s": "Array[File]",
"raw_r2s": "Array[File]",
"sample_groups": "File",
"sample_ids": "Array[String]",
"transcriptome_index": "File",
"tx2gene": "File"
},
"name": "RNASeqDEG",
"outputs": {
"deg_table": "deg.deg_table",
"multiqc_report": "report.multiqc_report"
},
"recipe": "rnaseq_differential_expression",
"tool_calls": [
{
"id": "qc",
"inputs": {
"r1": "raw_r1s",
"r2": "raw_r2s"
},
"params": {
"thread": 4
},
"step": "qc",
"tool": "fastp",
"version": "1.3.3"
},
{
"id": "quantify",
"inputs": {
"index": "transcriptome_index",
"r1": "qc.clean_r1",
"r2": "qc.clean_r2"
},
"params": {
"thread": 8
},
"step": "quantify",
"tool": "salmon",
"version": "1.9.0"
},
{
"id": "summarize",
"inputs": {
"quant_files": "quantify.quant_file",
"sample_ids": "sample_ids",
"tx2gene": "tx2gene"
},
"params": {},
"step": "summarize_transcripts",
"tool": "tximport",
"version": "1.30.0"
},
{
"id": "deg",
"inputs": {
"counts": "summarize.gene_counts",
"sample_groups": "sample_groups"
},
"params": {
"contrast": "condition"
},
"step": "differential_expression",
"tool": "deseq2",
"version": "1.42.1"
},
{
"id": "report",
"inputs": {
"report_files": [
"qc.html_report",
"qc.json_report",
"quantify.log_file"
]
},
"params": {},
"step": "qc_report",
"tool": "multiqc",
"version": "1.21"
}
]
}
}诊断摘要
分析错误
0
分析警告
0
修复记录
0
校验状态
WDL valid
Workflow DAG
14 nodes
16 edges
基于 Workflow IR 的 inputs、steps、scatter 和 outputs 构建依赖图；该图展示编译时结构，不代表真实任务执行状态。
结构可用
事件时间线
0 条事件
事件来自持久化 SSE envelope，可用于回放 run 的关键阶段。
已完成
暂无事件回放。
结构化产物
Recipe Tool Plan
Plan、Workflow IR、WDL 与诊断来自持久化 run snapshot。
{
"workflow": {
"inputs": {
"raw_r1s": "Array[File]",
"raw_r2s": "Array[File]",
"sample_groups": "File",
"sample_ids": "Array[String]",
"transcriptome_index": "File",
"tx2gene": "File"
},
"name": "RNASeqDEG",
"outputs": {
"deg_table": "deg.deg_table",
"multiqc_report": "report.multiqc_report"
},
"recipe": "rnaseq_differential_expression",
"tool_calls": [
{
"id": "qc",
"inputs": {
"r1": "raw_r1s",
"r2": "raw_r2s"
},
"params": {
"thread": 4
},
"step": "qc",
"tool": "fastp",
"version": "1.3.3"
},
{
"id": "quantify",
"inputs": {
"index": "transcriptome_index",
"r1": "qc.clean_r1",
"r2": "qc.clean_r2"
},
"params": {
"thread": 8
},
"step": "quantify",
"tool": "salmon",
"version": "1.9.0"
},
{
"id": "summarize",
"inputs": {
"quant_files": "quantify.quant_file",
"sample_ids": "sample_ids",
"tx2gene": "tx2gene"
},
"params": {},
"step": "summarize_transcripts",
"tool": "tximport",
"version": "1.30.0"
},
{
"id": "deg",
"inputs": {
"counts": "summarize.gene_counts",
"sample_groups": "sample_groups"
},
"params": {
"contrast": "condition"
},
"step": "differential_expression",
"tool": "deseq2",
"version": "1.42.1"
},
{
"id": "report",
"inputs": {
"report_files": [
"qc.html_report",
"qc.json_report",
"quantify.log_file"
]
},
"params": {},
"step": "qc_report",
"tool": "multiqc",
"version": "1.21"
}
]
}
}